Just for the record, I am still using Crossover to run STO. That said, it runs VERY well under vanilla wine as well (tried it when a friend was mulling a migration over to Ubuntu a bit back).
My Crossover bottle has the following installed into it:
The Mozilla plugin
IE7 (fixes some launcher bugs)
DX9 (DirectX Modern)
MSVC++ 2005 Runtime
MS XML Parser 3
MSLS31 (a dll that adds some unicode support)
Fonts (I installed all the ones that Crossover has).
Now, the naming of what I have in my bottle is different than what winetricks has. I was working for a while with a dev over at Codeweavers to build a cheat sheet that translates what they call things, and what winetricks calls it.
Here is the google docs spreadsheet we got done:https://docs.google.com/spreadsheet/ccc?key=0ApwL_nxxrmmcdDFCdUJPYjJ5M25GWDdaUEN4QlpkSEE
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